Browse of TCMCG005C13750 protein

CDS

Accession Number	TCMCG005C13750
gbkey	CDS
Protein Id	XP_020262895.1
Location	complement(join(68798072..68799058,68800753..68800896,68802664..68802741,68804844..68804960,68805074..68805130,68806615..68806746,68806854..68807051,68808871..68808981,68809129..68809344,68814356..68814541,68816047..68816172,68816174..68816475,68816478..68816553,68816555..68816680,68843881..68844165,68844387..68846027,68846075..68846238,68846610..68846781))
Gene	LOC109838876
GeneID	109838876
Organism	Asparagus officinalis

Protein

Length	1706aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020407306.1
Definition	LOW QUALITY PROTEIN: AP-4 complex subunit epsilon

EGGNOG-MAPPER Annotation

COG_category	U
Description	AP-4 complex subunit epsilon
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K12400        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04142        [VIEW IN KEGG] map04142        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0030117        [VIEW IN EMBL-EBI] GO:0030119        [VIEW IN EMBL-EBI] GO:0030124        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048475        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0098796        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTATTTGAGTGTTATCCTTGTTGATTCTGAGCTCGAAACCCTAATTTTCTTATTGGGTTTCAATGTAGTTTGCGCACTCATCATGTCGCCGCGTCGATCCAGAGGTTCCCGAGGCCGTTCGACTGCTCAGTCCCCTGAAGAGGCTGCTCCTGTTGCCGCTTCGCATGGGGGACTATACTTACACAGCTTATGTGTATCTCCTGTATCAGTCCATTTTCCTGCCACAATCTTCACCGTCGATGCAGTTACGGGCCAGAGTAGTGTCACTCATTCTTATTATGAGGGGATACCGTTAATCGAGTCTGCTCCTCAGTTCAAGTCAGAGGGAGCTATCGACTCAAACCAATGTATAAGGAAACCAGACTTCTTATTTGGTGACTCCATAAAGGATCCGGCGATTGTTTTCTGCAAGCCTGCGCAGTGGTTACACGAGGATGGTTCGTCATTTCTGTACTTGCCTTTTATGTGGTTACACGAGGATGGTTCGTCATTCCTGTACTTGCCTTTTATCCCTCGAGAGCATTCACTGTTAAAGTTCAGGAACTTATCGGTTGGACGTGAAATGTTCTGGAGATTAACAGAAAACCACGAACGTATTCATTGTGGTTTCATCGGGAAAGAGGCTACTCCAGGTTCCAGTGAAAGAGCTTCTATACGAGGGCTTCATCCAGGTGTCTTAGGCCAAGACAATATACCTCAGAATGAAAAAACAGCGCAGGCCAACACTGTGAAGAATCGTTTGGCTGCAATGAAGAAGAAATTACCCCACGAGAGTTTCAGATGTTATGGATGGGTCCATTATTATGGGGATAAATGGTGGTGGACCAGAATGACTCGATATGTGTTGAACCGTTGGGGGCGAGAGTTAGCAGAACTAGGGTTGGAAGTCCCGATCCGTGCCAGCATGCATGGTCTGCAAATTAGTGTAGGTCATTTCCTCCGTTTGTTCGAGATCTATAATCCTGACACTAATACGTTCTTCACCAAGAACGGGGAGCTCGGGTTACCATTGCACGAAATGATGAAGGTGTCTGGCTTGCCCATAGGCGATGTTCCATATCAAGAGTTCTTCCCAACCACCAGTCAGCTTAATAAGATGAAGGATCGGTCATCTGTGACCCACGAGACTTTATGGGAGCTGACTTGTCATTATCATATAGCTATGGCTGAGATGGAAACCAAAGCTAGGAAGAAATCTCCCCAGGTCAGCTTAAAGCAATTCGCCGATTATCTATTCAAGAACCTGGAGGATCGATCGGGAGAGGTATGTGGATTATCTCCTTTGAGCCCGGGTGACATCAATCGGCTGTTGGAGAAAACAAACGCACAATCTTACACTTCTCATTCAGAAGATGGGTTTTCGCACGGAACTAAATTCCGCCCTTATCTGTGGCAAGCTAGTGTTCCGATTCGCCCCACTACTCTGCTGGCTGGCTTTCTGGCCATATGGTTGAAGAGATGTGTAGTTCCTCACCAGTCATCCGACGCTATGCCAATGGAAGTGTTGTATCCAGCCGTCCAGTTAGCCACAGGTCGCAGATTATCCTTGCTTCCTGCTATGGTGGCGGCTATTCACAGTGGGTTACGGCAGTTAGTTTCCGCATTCACGCAAGAGAAAAAGAAACCCTCTGCCAGTATATCTGTTCCGAAACTAGAATTACCCTACACTTATTTGATGACATGGTTGGTTCTGCACCGGCCAGATTTAATGGAAGCTCCTGAGACGGTGGATCCTAGTCTTCCTCTTTTACAGACCCTTGAGGGTTGCAAATGGATCAACCATCGATGGCCGGACATAACGAGGCAGTTCAAAATTCATAAGTGTTGGAAATTCTTCCCTTGCTTCCCTCGGTTCTCCGGCACTTACAACACAACTTTATTGGATGCTGAAGACCCGAGGCAGAACCGTACTGTTCTAGATGTCGGATGTTTCAGATGGCTGATGAATATCCGACCTGGATATCTGTTGTTCAGGTGGTTGATTGCCGCTAATATCGTCACTCGACGTGGGAGAGTATCGGACTCAGAGGAAGAGGCAGCTCCGCAGCAAGCGACAGAGGCGACTCATGAGGCTATGGTGTCGACTCGAGGAAAAGAGGCTGCTGAATCCTCGAGAAAAGGAAAGGAACCGGTTCTTCCAGCTGGTAGTGAAGAGGAATTTGATAGTGAGGAAACGGAGACTTCTGAAGAGGCGGGTGAGACTGGCTCGAGTTCTGATGAAAGAGCTGGTCTCCCTGATTCTTTCTTTGAAAGGGGACTTACCCCGACCGAAACCCTAACCCTAACCCTGGAGCAGCTAAAGACAATCGGGCGGGAGCTCGCCATGGGCTCCCAAGGGGGCTGGAACCAATCCAAGGAGTTCCTCGACCTCGTCAAGGCCATCGGCGAGTCCCGATCCAAAGCCGAGGAGGATCGCATCGTCATCCACGAGATCGAAACCCTAAAGCGCCGCATCTCCGATCTCCCCCGCCGCAAGATGAAGGAGTTCATCATCCGCCTCGTCTACATCGAGATGCTAGGCCACGACGCCTCCTTCGGATACATCCACGCCGTCAAGATGACTCACGACGATTCGCTCCTCTTGAAGAGGACTGGTTACTTGGCGGTGACGCTGTTCTTGAACGAGGATCACGATCTGATAATTTTGATCGTGAACACGATACAGAAGGATTTGAGGTCGGATAACTACTTGGTGGTTTGCGCGGCGTTGACGGCGGTGTGTAAGCTGATCAATGAGGAGACGATACCTGCTGTGTTGCCGCAGCCGCAGGTGGTTGAGCTGCTAGGGCATGGAAAGGAGGCGGTGAGGAAGAAGGCGGTGATGGCGCTGCACCGGTTTTATCAGAAGGCCCCGGCTCAGGTCAACCATCTGGTCTCCAACTTCAGAAAGAGACTTTGTGATAATGATCCTGGAGTCATGGGTGCTACACTTTGTCCTCTTTTTGATCTCGTTATGGCTGATGTAAATTCGTACAAAGATTTGGTTGTTAGTTTTGTTAGCATTCTTAAACAAGTTGCTGAAAGGAGACTTCCGAAAACTTATGATTACCATCAAATGCCAGCTCCCTTCATTCAGATAAAGTTGCTAAAGATTCTTGCAGTGCTTGGAAGTGGTGATAAACAAGCAAGTGGACACATGTATACTGTACTGGGTGACATTTTTAGGAAGTGTGAATCATCAAGCAACATTGGAAATGCTGTGATTTATCAATGTATATGTTGTGTTTCTTCCATCTATCCCAATCCTAAATTACTAGATGCAGCTGCTGGAGCAACTTCAAAATTTCTGAAGAGTGATAGTCACAACCTGAAATATATGGGCATTGATGCACTTGGTCGTCTGATAAAAATAAGTCCAGACATTGCCGAGGAACACCAGCTTGCTGTTATTGATTGCTTGGAGGATCCTGATGACACTCTGAAGCGCAAGACATTTGAACTGCTTTACAAGATGACCAAGTCCACTAATGTAGAGGTCATAGTTGATAGGATGATTGATTACATGATAAGCATCAACGACAATCACTATAAAACTGAAATAGCCTCACGCTGTGTTGAGCTTGCTGAACAATTTGCACCGAGCAATCAATGGTTTATCCAGACCATGAATAAGGTCTTTGAACATGCAGGTGATCTTGTTAATATTAGAGTGGCCCACAATTTAATGCGGCTACTTGCTGAGGGATTTGGCGAGGATGATGAAGGTGCCGATAGTCAACTGAGATCATCGGCTGTCGACTCATATTTACATATCATTGGAGAGCCAAAGCTTCCGTCTGTTTTTCTGCAAGTAATATGCTGGGTTCTCGGGGAATATGGAATAGCAGATGGGAAGTATTCTGCTTCTTATGTAATTGGAAAGTTGTGTGATGTTGCAGAGGCCCATTCAAGCGACAATACAGTAAAGGCTTATGCAATAACAGCCATCATGAAAATATTTGCGTTTGAGATTGCTGCTGGAAGGAAAGTGGACATGTTGCCTGAGTGTCAATCATTAATTGATGAACTATCAGCATCTCATTCAACAGACCTGCAGCAGCGTGCATATGAGCTACAATCCTTGTTGGGCTTAGATAGAGGTGCTATTGAGACTGTAATGCCATCAGATGCTAGTTGTGAAGACATTGAGGTCGATAAGAACCTGTCTTTCCTCAATAGTTATGTGAACCGGGCCATAGAAAAGGGTGCAAAACCCTACATCCCAGAAAGTGAGCGATTAGGATTTTCCAGTGTTGAGAATTACAGAGGCCACTACCAGCAAGAATCTTCCAGTCACGCCCTCAGATTCGAGGCCTACGAACTTCCTAAACCTGCATCAGTTACCAAGGTTCATGCTTCTTCACTGCCGACCCCCGTGACTGACCTTGTGCCAGTTACTGAACCAACTTATGCTAGAGAAACTCATCATGCTCCAAAGACCCTATCCACACCCGATGTTCTATCTGCAGAGGTTGGAGTCAGGCTTCGCCTTGATGGTGTTCAAAAGAAATGGGGCAAGCCTACTTACACATCATCCTCTTCAACACCGTCTAGTTCAACCTCTACCACCCAGAAGTCATCAAATGGAGTGTCGCATCATGAAGTTAGTAGTTCAGTTGACTCAAGGAGATATCAGCAAGTTGAGGTTCCAGCTGAGAAGCAAAGGTTGGCTGCTTCATTATTTGGGGCCTCATCATCCAAAATCGAGAAGAGACCGTTATCATCTACCCACAAGACAGGAAAAAGGACTGCAGTACCATCGTCTTCTGAACCTCTTAAAGAAAAACCAGTTGTTGTTCCTTCCACACCTCCACCAGATCTTCTTGATTTCGGCGAAGAACCAGCTATCACTCCAAGTGTTGCATCTGTCGATCCCTTCATGCAATTAGAAGGTCTTATTGGACCAAACTCAGCTTCATCTCCTGCACCATCACTCGATTCTAAAGCGGCCGATCTTATGGGCTTATTCGATGATACTTCATCAGATGATAGGAATTCCCATGGAGCAGCAAATGTGATTCCTACAAAGAAGGGCCCAAACCCACAAGACTCTTTAGAGAAGGATGCAACTGCGAGGCAAGTTGGGGTGACACCAACAGGGAACAATCCGAACTTGTTTAGGGACTTGTTTGGCTGA

Protein:   MYLSVILVDSELETLIFLLGFNVVCALIMSPRRSRGSRGRSTAQSPEEAAPVAASHGGLYLHSLCVSPVSVHFPATIFTVDAVTGQSSVTHSYYEGIPLIESAPQFKSEGAIDSNQCIRKPDFLFGDSIKDPAIVFCKPAQWLHEDGSSFLYLPFMWLHEDGSSFLYLPFIPREHSLLKFRNLSVGREMFWRLTENHERIHCGFIGKEATPGSSERASIRGLHPGVLGQDNIPQNEKTAQANTVKNRLAAMKKKLPHESFRCYGWVHYYGDKWWWTRMTRYVLNRWGRELAELGLEVPIRASMHGLQISVGHFLRLFEIYNPDTNTFFTKNGELGLPLHEMMKVSGLPIGDVPYQEFFPTTSQLNKMKDRSSVTHETLWELTCHYHIAMAEMETKARKKSPQVSLKQFADYLFKNLEDRSGEVCGLSPLSPGDINRLLEKTNAQSYTSHSEDGFSHGTKFRPYLWQASVPIRPTTLLAGFLAIWLKRCVVPHQSSDAMPMEVLYPAVQLATGRRLSLLPAMVAAIHSGLRQLVSAFTQEKKKPSASISVPKLELPYTYLMTWLVLHRPDLMEAPETVDPSLPLLQTLEGCKWINHRWPDITRQFKIHKCWKFFPCFPRFSGTYNTTLLDAEDPRQNRTVLDVGCFRWLMNIRPGYLLFRWLIAANIVTRRGRVSDSEEEAAPQQATEATHEAMVSTRGKEAAESSRKGKEPVLPAGSEEEFDSEETETSEEAGETGSSSDERAGLPDSFFERGLTPTETLTLTLEQLKTIGRELAMGSQGGWNQSKEFLDLVKAIGESRSKAEEDRIVIHEIETLKRRISDPXPRRKMKEFIIRLVYIEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLRSDNYLVVCAALTAVCKLINEETIPAVLPQPQVVELLGHGKEAVRKKAVMALHRFYQKAPAQVNHLVSNFRKRLCDNDPGVMGATLCPLFDLVMADVNSYKDLVVSFVSILKQVAERRLPKTYDYHQMPAPFIQIKLLKILAVLGSGDKQASGHMYTVLGDIFRKCESSSNIGNAVIYQCICCVSSIYPNPKLLDAAAGATSKFLKSDSHNLKYMGIDALGRLIKISPDIAEEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLLAEGFGEDDEGADSQLRSSAVDSYLHIIGEPKLPSVFLQVICWVLGEYGIADGKYSASYVIGKLCDVAEAHSSDNTVKAYAITAIMKIFAFEIAAGRKVDMLPECQSLIDELSASHSTDLQQRAYELQSLLGLDRGAIETVMPSDASCEDIEVDKNLSFLNSYVNRAIEKGAKPYIPESERLGFSSVENYRGHYQQESSSHALRFEAYELPKPASVTKVHASSLPTPVTDLVPVTEPTYARETHHAPKTLSTPDVLSAEVGVRLRLDGVQKKWGKPTYTSSSSTPSSSTSTTQKSSNGVSHHEVSSSVDSRRYQQVEVPAEKQRLAASLFGASSSKIEKRPLSSTHKTGKRTAVPSSSEPLKEKPVVVPSTPPPDLLDFGEEPAITPSVASVDPFMQLEGLIGPNSASSPAPSLDSKAADLMGLFDDTSSDDRNSHGAANVIPTKKGPNPQDSLEKDATARQVGVTPTGNNPNLFRDLFG